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const.c

#include "const.h"

bit8_t nst_nt4_table[256] = {
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 5 /*'-'*/, 4, 4,
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 0, 4, 1,  4, 4, 4, 2,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  3, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 0, 4, 1,  4, 4, 4, 2,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  3, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4, 
      4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4,  4, 4, 4, 4
};

char *nst_nt4_rev_table = "ACGTN-";

unsigned char nst_nt16_table[256] = {
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15 /*'-'*/,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15, 1,14, 2, 13,15,15, 4, 11,15,15,12, 15, 3,15,15,
      15,15, 5, 6,  8,15, 7, 9,  0,10,15,15, 15,15,15,15,
      15, 1,14, 2, 13,15,15, 4, 11,15,15,12, 15, 3,15,15,
      15,15, 5, 6,  8,15, 7, 9,  0,10,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15,
      15,15,15,15, 15,15,15,15, 15,15,15,15, 15,15,15,15
};

char *nst_nt16_rev_table = "XACMGRSVTWYHKDBN";
bit8_t nst_nt16_nt4_table[] = { 4, 0, 1, 4, 2, 4, 4, 4, 3, 4, 4, 4, 4, 4, 4, 4 };
int nst_nt16_count_table[] = { 4, 1, 1, 2, 1, 2, 2, 3, 1, 2, 2, 3, 2, 3, 3, 4 };

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